Gene detail information of Glyur000652s00019443.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49950.1 | 1.00E-86 | GRAS family transcription factor |
| NR | XP_003543373.2 | 0 | PREDICTED: scarecrow-like protein 32-like [Glycine max] |
| Swissprot | tr|Q9SN22|SCL32_ARATH | 2.00E-104 | Scarecrow-like protein 32 |
| trEMBL | tr|K7M2U4|K7M2U4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38080.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00652 | 124789 | 127055 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000652s00019443.1 | PF03514.9 | GRAS | 51 | 439 | 6.70E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.304 |
| SRR1783600 | control | 0.247 |
| SRR1783602 | moderate drought stress | 0.171 |
| SRR1811619 | moderate drought stress | 0.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.628 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.617 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.258 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.167 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.194 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.879 |
| SRR2967015 | Control (Tissue:root) | 8.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.198 |
| SRR9715740 | Leave | 0.095 |
| SRR9715741 | Leave | 0.283 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.053 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.071 |
| SRR8400027 | Control-Root | 1.242 |