Gene detail information of Glyur000653s00025428.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34050.1 | 2.00E-76 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | KHN42093.1 | 2.51E-98 | Caffeoyl-CoA O-methyltransferase 2 [Glycine soja] |
| COG | YP_007072655.1 | 2.00E-46 | caffeoyl-CoA O-methyltransferase [Leptolyngbya sp. PCC 7376] |
| Swissprot | tr|O49499|CAMT4_ARATH | 2.00E-95 | Caffeoyl-CoA O-methyltransferase 1 |
| trEMBL | tr|I1LHD1|I1LHD1_SOYBN | 9.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G05800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00653 | 146 | 891 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00588 | E2.1.1.104 | EC:2.1.1.104 | Phenylalanine metabolism | map00360 |
| Phenylpropanoid biosynthesis | map00940 | |||
| Stilbenoid, diarylheptanoid and gingerol biosynthesis | map00945 | |||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000653s00025428.1 | PF01596.12 | Methyltransf_3 | 1 | 174 | 2.70E-73 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.010 |
| SRR1783600 | control | 0.067 |
| SRR1783602 | moderate drought stress | 0.071 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.695 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.240 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.825 |
| SRR2967015 | Control (Tissue:root) | 1.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.240 |
| SRR9715740 | Leave | 0.128 |
| SRR9715741 | Leave | 0.843 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.087 |
| SRR8400027 | Control-Root | 0.200 |