Gene detail information of Glyur000653s00025435.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67080.11.00E-96mitogen-activated protein kinase kinase kinase 19
NRKEH16526.10MAP3K-like kinase [Medicago truncatula]
COGYP_003270925.16.00E-24serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|O22042|M3K3_ARATH1.00E-46Mitogen-activated protein kinase kinase kinase 3
trEMBLtr|A0A072TH41|A0A072TH41_MEDTR0MAP3K-like kinase {ECO:0000313|EMBL:KEH16526.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006534666847699-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000653s00025435.1PF00069.20Pkinase52671.20E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.435
SRR1783600control1.373
SRR1783602moderate drought stress2.492
SRR1811619moderate drought stress2.708

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.795
DRR006520Root Summer glycyrrhizin high producing strain42.195
DRR006521Root Winter glycyrrhizin high producing strain0.108
DRR006522Root Winter glycyrrhizin high producing strain0.106
DRR006523Root Summer glycyrrhizin low producing strain12.829
DRR006524Root Summer glycyrrhizin low producing strain11.883
DRR006525Leaf Summer glycyrrhizin high producing strain3.765
DRR006526Leaf Summer glycyrrhizin high producing strain3.877

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.362
SRR2868004Drought Stress(Tissue:root)12.799
SRR2967015Control (Tissue:root)22.777

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave49.684
SRR9715740Leave36.525
SRR9715741Leave50.683
SRR9715739Root27.728
SRR9715742Root97.424
SRR9715743Root76.413

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.940
SRR8749028MeJA induced 9h6.691
SRR8749029MeJA induced 9h6.942
SRR8749030Uninduced2.253
SRR8749031Uninduced0.891
SRR8749032Uninduced3.895

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.553
SRR8400027Control-Root21.717

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved