Gene detail information of Glyur000653s00025440.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67030.10zeaxanthin epoxidase (ZEP) (ABA1)
NRKHN26473.10Zeaxanthin epoxidase, chloroplastic [Glycine soja]
COGYP_631595.11.00E-55FAD-dependent oxidoreductase [Myxococcus xanthus DK 1622]
Swissprottr|O81360|ABA2_PRUAR0Zeaxanthin epoxidase, chloroplastic (Precursor)
trEMBLtr|I1MVX7|I1MVX7_SOYBN0Zeaxanthin epoxidase, chloroplastic {ECO:0000256|PIRNR:PIRNR036989}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006539039296966+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09838ZEP, ABA1 EC:1.14.15.21 Carotenoid biosynthesis map00906


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009688  abscisic acid biosynthetic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0009507  chloroplast

GO:0016020  membrane


molecular_function

GO:0005515  protein binding

GO:0009540  zeaxanthin epoxidase [overall] activity

GO:0016491  oxidoreductase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000653s00025440.1PF01494.14FAD_binding_3804301.20E-15
Glyur000653s00025440.1PF00498.21FHA5416061.10E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.115
SRR1783600control0.137
SRR1783602moderate drought stress0.369
SRR1811619moderate drought stress0.360

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.276
DRR006520Root Summer glycyrrhizin high producing strain1.213
DRR006521Root Winter glycyrrhizin high producing strain18.912
DRR006522Root Winter glycyrrhizin high producing strain17.949
DRR006523Root Summer glycyrrhizin low producing strain2.279
DRR006524Root Summer glycyrrhizin low producing strain2.313
DRR006525Leaf Summer glycyrrhizin high producing strain262.296
DRR006526Leaf Summer glycyrrhizin high producing strain260.804

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.932
SRR2868004Drought Stress(Tissue:root)2.110
SRR2967015Control (Tissue:root)2.949

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave239.576
SRR9715740Leave369.804
SRR9715741Leave247.394
SRR9715739Root0.131
SRR9715742Root0.609
SRR9715743Root0.508

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.859
SRR8749028MeJA induced 9h1.389
SRR8749029MeJA induced 9h3.015
SRR8749030Uninduced1.643
SRR8749031Uninduced4.485
SRR8749032Uninduced5.932

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.594
SRR8400027Control-Root0.483

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved