Gene detail information of Glyur000654s00029197.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74110.17.00E-146cytochrome P450, family 78, subfamily A, polypeptide 10
NRXP_003524168.10PREDICTED: cytochrome P450 78A5-like [Glycine max]
COGYP_003950164.11.00E-28cytochrome p450 [Stigmatella aurantiaca DW4/3-1]
Swissprottr|Q9LMX7|C78A5_ARATH2.00E-172Cytochrome P450 78A5
trEMBLtr|I1K3L7|I1K3L7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G27970.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00654108086111066-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP78A10


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000654s00029197.1PF00067.17p450654923.40E-79


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.571
SRR1783600control1.558
SRR1783602moderate drought stress3.264
SRR1811619moderate drought stress3.164

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.429
DRR006520Root Summer glycyrrhizin high producing strain5.062
DRR006521Root Winter glycyrrhizin high producing strain91.341
DRR006522Root Winter glycyrrhizin high producing strain88.965
DRR006523Root Summer glycyrrhizin low producing strain2.084
DRR006524Root Summer glycyrrhizin low producing strain2.138
DRR006525Leaf Summer glycyrrhizin high producing strain1.898
DRR006526Leaf Summer glycyrrhizin high producing strain1.958

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.651
SRR2868004Drought Stress(Tissue:root)18.995
SRR2967015Control (Tissue:root)18.893

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.240
SRR9715740Leave0.706
SRR9715741Leave1.060
SRR9715739Root0.000
SRR9715742Root0.730
SRR9715743Root0.618

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.107
SRR8749028MeJA induced 9h4.811
SRR8749029MeJA induced 9h3.391
SRR8749030Uninduced1.359
SRR8749031Uninduced1.311
SRR8749032Uninduced1.902

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.574
SRR8400027Control-Root2.162

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved