Gene detail information of Glyur000658s00024846.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G09830.24.00E-104Protein kinase superfamily protein
NRXP_003590458.10Protein kinase 2A [Medicago truncatula]
COGYP_004266623.14.00E-16serine/threonine protein kinase with PASTA sensor(s) [Syntrophobotulus glycolicus DSM 8271]
Swissprottr|Q9LFP7|Y5158_ARATH1.00E-65Probable receptor-like protein kinase At5g15080
trEMBLtr|G7IA92|G7IA92_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK42573.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006586964372312-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000658s00024846.1PF00069.20Pkinase1493041.90E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.527
SRR1783600control8.455
SRR1783602moderate drought stress8.463
SRR1811619moderate drought stress8.220

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.065
DRR006520Root Summer glycyrrhizin high producing strain13.104
DRR006521Root Winter glycyrrhizin high producing strain40.848
DRR006522Root Winter glycyrrhizin high producing strain40.712
DRR006523Root Summer glycyrrhizin low producing strain12.293
DRR006524Root Summer glycyrrhizin low producing strain13.088
DRR006525Leaf Summer glycyrrhizin high producing strain14.022
DRR006526Leaf Summer glycyrrhizin high producing strain14.278

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.512
SRR2868004Drought Stress(Tissue:root)24.025
SRR2967015Control (Tissue:root)26.962

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.339
SRR9715740Leave20.647
SRR9715741Leave15.252
SRR9715739Root2.121
SRR9715742Root5.629
SRR9715743Root5.519

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.464
SRR8749028MeJA induced 9h63.030
SRR8749029MeJA induced 9h62.841
SRR8749030Uninduced34.102
SRR8749031Uninduced74.875
SRR8749032Uninduced71.928

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.388
SRR8400027Control-Root19.766

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved