Gene detail information of Glyur000659s00029682.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10430.13.00E-175protein phosphatase 2A-2
NRXP_003628600.10Serine/threonine protein phosphatase [Medicago truncatula]
COGYP_001541554.12.00E-36metallophosphoesterase [Caldivirga maquilingensis IC-167]
Swissprottr|Q9ZSE4|PP2A_HEVBR0Serine/threonine-protein phosphatase PP2A catalytic subunit
trEMBLtr|G7LEN1|G7LEN1_MEDTR0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006598303987563+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04382PPP2C EC:3.1.3.16 mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730
Hepatitis Cmap05160
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000659s00029682.1PF00149.23Metallophos482403.20E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.844
SRR1783600control18.077
SRR1783602moderate drought stress13.205
SRR1811619moderate drought stress13.176

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.945
DRR006520Root Summer glycyrrhizin high producing strain21.675
DRR006521Root Winter glycyrrhizin high producing strain20.074
DRR006522Root Winter glycyrrhizin high producing strain19.515
DRR006523Root Summer glycyrrhizin low producing strain21.404
DRR006524Root Summer glycyrrhizin low producing strain22.636
DRR006525Leaf Summer glycyrrhizin high producing strain11.081
DRR006526Leaf Summer glycyrrhizin high producing strain10.927

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.873
SRR2868004Drought Stress(Tissue:root)31.105
SRR2967015Control (Tissue:root)29.403

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.103
SRR9715740Leave16.349
SRR9715741Leave19.966
SRR9715739Root11.740
SRR9715742Root19.460
SRR9715743Root17.772

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.634
SRR8749028MeJA induced 9h19.570
SRR8749029MeJA induced 9h19.598
SRR8749030Uninduced23.557
SRR8749031Uninduced22.804
SRR8749032Uninduced19.620

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.078
SRR8400027Control-Root32.130

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved