Gene detail information of Glyur000659s00029689.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G46030.11.00E-30
NRAFK36895.13.35E-55unknown [Medicago truncatula]
Swissprottr|Q8LHP0|ELOF1_ORYSJ2.00E-53Transcription elongation factor 1 homolog
trEMBLtr|I3S9F3|I3S9F3_MEDTR1.00E-55Uncharacterized protein {ECO:0000313|EMBL:AFK36895.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00659122822125169+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000659s00029689.1PF05129.8Elf12817.30E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control184.145
SRR1783600control179.744
SRR1783602moderate drought stress238.059
SRR1811619moderate drought stress236.311

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain560.922
DRR006520Root Summer glycyrrhizin high producing strain548.912
DRR006521Root Winter glycyrrhizin high producing strain1050.936
DRR006522Root Winter glycyrrhizin high producing strain1011.698
DRR006523Root Summer glycyrrhizin low producing strain453.951
DRR006524Root Summer glycyrrhizin low producing strain455.564
DRR006525Leaf Summer glycyrrhizin high producing strain159.889
DRR006526Leaf Summer glycyrrhizin high producing strain157.207

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)292.396
SRR2868004Drought Stress(Tissue:root)296.775
SRR2967015Control (Tissue:root)299.053

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave224.138
SRR9715740Leave250.179
SRR9715741Leave312.434
SRR9715739Root309.615
SRR9715742Root307.725
SRR9715743Root307.359

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h281.717
SRR8749028MeJA induced 9h258.878
SRR8749029MeJA induced 9h314.421
SRR8749030Uninduced300.658
SRR8749031Uninduced278.642
SRR8749032Uninduced322.133

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root387.790
SRR8400027Control-Root326.809

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved