Gene detail information of Glyur000659s00029690.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28520.2 | 6.00E-178 | vascular plant one zinc finger protein |
| NR | XP_003529356.1 | 0 | PREDICTED: transcription factor VOZ1-like [Glycine max] |
| Swissprot | tr|Q9SGQ0|VOZ1_ARATH | 0 | Transcription factor VOZ1 |
| trEMBL | tr|I1KLR2|I1KLR2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G32374.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00659 | 126751 | 131540 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | VOZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.531 |
| SRR1783600 | control | 13.333 |
| SRR1783602 | moderate drought stress | 17.070 |
| SRR1811619 | moderate drought stress | 17.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.729 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.228 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.221 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.904 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.983 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.262 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.917 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 34.395 |
| SRR2868004 | Drought Stress(Tissue:root) | 36.797 |
| SRR2967015 | Control (Tissue:root) | 46.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 29.090 |
| SRR9715740 | Leave | 29.216 |
| SRR9715741 | Leave | 28.497 |
| SRR9715739 | Root | 18.473 |
| SRR9715742 | Root | 34.320 |
| SRR9715743 | Root | 31.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.555 |
| SRR8749028 | MeJA induced 9h | 17.930 |
| SRR8749029 | MeJA induced 9h | 9.289 |
| SRR8749030 | Uninduced | 14.322 |
| SRR8749031 | Uninduced | 6.208 |
| SRR8749032 | Uninduced | 6.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 30.855 |
| SRR8400027 | Control-Root | 27.875 |