Gene detail information of Glyur000660s00025397.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G12110.13.00E-138sterol-4alpha-methyl oxidase 1-1
NRXP_004515763.10PREDICTED: methylsterol monooxygenase 1-1-like [Cicer arietinum]
COGYP_004449996.14.00E-09fatty acid hydroxylase [Haliscomenobacter hydrossis DSM 1100]
Swissprottr|Q8L7W5|SMO11_ARATH6.00E-174Methylsterol monooxygenase 1-1
trEMBLtr|G7JK82|G7JK82_MEDTR0Sterol C4-methyl oxidase 1-2 {ECO:0000313|EMBL:AES90994.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006605489557988+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14423SMO1 EC:1.14.13.72 Steroid biosynthesis map00100


Gene Ontology

biological_process

GO:0006633  fatty acid biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000660s00025397.1PF04116.8FA_hydroxylase1312435.60E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control70.525
SRR1783600control71.082
SRR1783602moderate drought stress88.131
SRR1811619moderate drought stress87.261

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain47.033
DRR006520Root Summer glycyrrhizin high producing strain46.028
DRR006521Root Winter glycyrrhizin high producing strain42.775
DRR006522Root Winter glycyrrhizin high producing strain41.565
DRR006523Root Summer glycyrrhizin low producing strain36.101
DRR006524Root Summer glycyrrhizin low producing strain36.481
DRR006525Leaf Summer glycyrrhizin high producing strain14.649
DRR006526Leaf Summer glycyrrhizin high producing strain14.683

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)60.077
SRR2868004Drought Stress(Tissue:root)33.144
SRR2967015Control (Tissue:root)43.675

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.440
SRR9715740Leave9.784
SRR9715741Leave15.632
SRR9715739Root43.669
SRR9715742Root43.995
SRR9715743Root39.719

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.414
SRR8749028MeJA induced 9h20.458
SRR8749029MeJA induced 9h18.219
SRR8749030Uninduced11.880
SRR8749031Uninduced8.364
SRR8749032Uninduced9.623

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root71.719
SRR8400027Control-Root65.177

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved