Gene detail information of Glyur000662s00023478.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38900.35.00E-58Basic-leucine zipper (bZIP) transcription factor family protein
NRXP_003523619.10PREDICTED: uncharacterized protein LOC100779731 [Glycine max]
Swissprottr|Q69IL4|RF2A_ORYSJ8.00E-40Transcription factor RF2a
trEMBLtr|I1JT50|I1JT50_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02850.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0066221427803+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000662s00023478.1PF07716.10bZIP_23594112.40E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.340
SRR1783600control14.586
SRR1783602moderate drought stress21.535
SRR1811619moderate drought stress21.297

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.238
DRR006520Root Summer glycyrrhizin high producing strain12.855
DRR006521Root Winter glycyrrhizin high producing strain9.281
DRR006522Root Winter glycyrrhizin high producing strain9.021
DRR006523Root Summer glycyrrhizin low producing strain13.542
DRR006524Root Summer glycyrrhizin low producing strain13.500
DRR006525Leaf Summer glycyrrhizin high producing strain11.105
DRR006526Leaf Summer glycyrrhizin high producing strain10.699

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.740
SRR2868004Drought Stress(Tissue:root)21.967
SRR2967015Control (Tissue:root)20.367

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.844
SRR9715740Leave9.204
SRR9715741Leave13.856
SRR9715739Root0.980
SRR9715742Root3.964
SRR9715743Root3.244

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.847
SRR8749028MeJA induced 9h19.766
SRR8749029MeJA induced 9h8.643
SRR8749030Uninduced11.000
SRR8749031Uninduced11.251
SRR8749032Uninduced7.580

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.105
SRR8400027Control-Root23.841

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved