Gene detail information of Glyur000665s00020418.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04940.22.00E-142SU(VAR)3-9 homolog 1
NRXP_006576757.10PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Glycine max]
COGNP_295256.13.00E-21hypothetical protein DR_1533 [Deinococcus radiodurans R1]
Swissprottr|Q93YF5|SUVH1_TOBAC0Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
trEMBLtr|K7KEJ7|K7KEJ7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G27441.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006656235366430+


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11420EHMT EC:2.1.1.43 Lysine degradation map00310
Longevity regulating pathway - mammalmap04211


Gene Ontology

biological_process

GO:0016571  histone methylation

GO:0034968  histone lysine methylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding

GO:0018024  histone-lysine N-methyltransferase activity

GO:0042393  histone binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000665s00020418.1PF02182.12SAD_SRA2624162.00E-58
Glyur000665s00020418.1PF05033.11Pre-SET4445431.40E-19
Glyur000665s00020418.1PF00856.23SET5626312.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.890
SRR1783600control35.229
SRR1783602moderate drought stress39.282
SRR1811619moderate drought stress38.352

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.432
DRR006520Root Summer glycyrrhizin high producing strain36.392
DRR006521Root Winter glycyrrhizin high producing strain35.510
DRR006522Root Winter glycyrrhizin high producing strain34.113
DRR006523Root Summer glycyrrhizin low producing strain51.102
DRR006524Root Summer glycyrrhizin low producing strain51.090
DRR006525Leaf Summer glycyrrhizin high producing strain15.761
DRR006526Leaf Summer glycyrrhizin high producing strain15.792

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)50.427
SRR2868004Drought Stress(Tissue:root)50.953
SRR2967015Control (Tissue:root)57.063

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.422
SRR9715740Leave26.542
SRR9715741Leave36.918
SRR9715739Root38.317
SRR9715742Root79.285
SRR9715743Root69.873

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.848
SRR8749028MeJA induced 9h64.050
SRR8749029MeJA induced 9h39.648
SRR8749030Uninduced35.138
SRR8749031Uninduced20.947
SRR8749032Uninduced18.718

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.588
SRR8400027Control-Root45.819

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved