Gene detail information of Glyur000667s00025237.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65310.18.00E-38homeobox protein 5
NRXP_004502034.11.77E-110PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cicer arietinum]
Swissprottr|P46667|ATHB5_ARATH4.00E-44Homeobox-leucine zipper protein ATHB-5
trEMBLtr|G7J6Q0|G7J6Q0_MEDTR6.00E-110Homeobox associated leucine zipper protein {ECO:0000313|EMBL:AES71632.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006673437136227+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000667s00025237.1PF00046.24Homeobox661181.10E-16
Glyur000667s00025237.1PF02183.13HALZ1201371.40E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.487
SRR1783600control37.078
SRR1783602moderate drought stress25.261
SRR1811619moderate drought stress24.855

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain50.576
DRR006520Root Summer glycyrrhizin high producing strain49.195
DRR006521Root Winter glycyrrhizin high producing strain24.153
DRR006522Root Winter glycyrrhizin high producing strain23.490
DRR006523Root Summer glycyrrhizin low producing strain50.220
DRR006524Root Summer glycyrrhizin low producing strain50.125
DRR006525Leaf Summer glycyrrhizin high producing strain1.414
DRR006526Leaf Summer glycyrrhizin high producing strain1.450

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.702
SRR2868004Drought Stress(Tissue:root)3.801
SRR2967015Control (Tissue:root)2.015

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.323
SRR9715740Leave0.715
SRR9715741Leave0.614
SRR9715739Root8.317
SRR9715742Root21.154
SRR9715743Root21.411

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.932
SRR8749028MeJA induced 9h3.427
SRR8749029MeJA induced 9h6.107
SRR8749030Uninduced4.134
SRR8749031Uninduced0.053
SRR8749032Uninduced0.336

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root77.039
SRR8400027Control-Root58.191

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved