Gene detail information of Glyur000671s00022534.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G05320.12.00E-155beta-1,2-N-acetylglucosaminyltransferase II
NRKHN24206.10Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Glycine soja]
trEMBLtr|V7BLF7|V7BLF7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17431.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006713265433970-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT16


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00736MGAT2 EC:2.4.1.143 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0009312  oligosaccharide biosynthetic process


cellular_component

GO:0005795  Golgi stack

GO:0016021  integral component of membrane


molecular_function

GO:0008455  alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000671s00022534.1PF05060.9MGAT2944221.80E-138


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.058
SRR1783600control16.292
SRR1783602moderate drought stress18.003
SRR1811619moderate drought stress17.708

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.902
DRR006520Root Summer glycyrrhizin high producing strain16.017
DRR006521Root Winter glycyrrhizin high producing strain16.425
DRR006522Root Winter glycyrrhizin high producing strain15.631
DRR006523Root Summer glycyrrhizin low producing strain19.800
DRR006524Root Summer glycyrrhizin low producing strain20.218
DRR006525Leaf Summer glycyrrhizin high producing strain9.915
DRR006526Leaf Summer glycyrrhizin high producing strain10.005

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.422
SRR2868004Drought Stress(Tissue:root)27.255
SRR2967015Control (Tissue:root)23.932

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.270
SRR9715740Leave20.288
SRR9715741Leave22.169
SRR9715739Root17.671
SRR9715742Root19.356
SRR9715743Root19.910

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.860
SRR8749028MeJA induced 9h15.096
SRR8749029MeJA induced 9h12.236
SRR8749030Uninduced12.617
SRR8749031Uninduced11.353
SRR8749032Uninduced9.661

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.621
SRR8400027Control-Root17.491

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved