Gene detail information of Glyur000671s00022540.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06160.1 | 1.00E-11 | AP2/B3-like transcriptional factor family protein |
| NR | XP_004497762.1 | 3.40E-73 | PREDICTED: B3 domain-containing protein At5g60130-like [Cicer arietinum] |
| Swissprot | tr|Q9M8K2|REM21_ARATH | 2.00E-13 | B3 domain-containing protein REM21 |
| trEMBL | tr|A0A072VGJ6|A0A072VGJ6_MEDTR | 1.00E-72 | Plant-specific B3-DNA-binding domain protein {ECO:0000313|EMBL:KEH41174.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00671 | 81765 | 84886 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000671s00022540.1 | PF02362.16 | B3 | 34 | 92 | 2.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.257 |
| SRR1783600 | control | 0.242 |
| SRR1783602 | moderate drought stress | 0.280 |
| SRR1811619 | moderate drought stress | 0.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.028 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.129 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.650 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.648 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.205 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.140 |
| SRR2967015 | Control (Tissue:root) | 0.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.206 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.061 |