Gene detail information of Glyur000672s00022927.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80840.1 | 2.00E-32 | WRKY DNA-binding protein 40 |
| NR | XP_004498813.1 | 9.36E-129 | PREDICTED: probable WRKY transcription factor 40-like [Cicer arietinum] |
| Swissprot | tr|Q9SAH7|WRK40_ARATH | 4.00E-36 | Probable WRKY transcription factor 40 |
| trEMBL | tr|G7I7N0|G7I7N0_MEDTR | 3.00E-124 | WRKY family transcription factor {ECO:0000313|EMBL:AES59082.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00672 | 70844 | 82653 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000672s00022927.1 | PF03106.10 | WRKY | 355 | 413 | 5.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.080 |
| SRR1783600 | control | 0.081 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.059 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.566 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.716 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 53.849 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.546 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.352 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.801 |
| SRR2967015 | Control (Tissue:root) | 1.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 60.146 |
| SRR9715740 | Leave | 19.325 |
| SRR9715741 | Leave | 86.947 |
| SRR9715739 | Root | 0.026 |
| SRR9715742 | Root | 0.794 |
| SRR9715743 | Root | 0.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.661 |
| SRR8749028 | MeJA induced 9h | 1.689 |
| SRR8749029 | MeJA induced 9h | 2.562 |
| SRR8749030 | Uninduced | 2.441 |
| SRR8749031 | Uninduced | 4.568 |
| SRR8749032 | Uninduced | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.035 |
| SRR8400027 | Control-Root | 0.236 |