Gene detail information of Glyur000673s00024284.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12680.19.00E-177phosphoenolpyruvate carboxylase-related kinase 2
NRXP_006578301.10PREDICTED: serine/threonine-protein kinase PEPKR2-like isoform X1 [Glycine max]
COGYP_006921214.19.00E-31serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
Swissprottr|Q8W490|PEPK2_ARATH0Serine/threonine-protein kinase PEPKR2
trEMBLtr|I1JV96|I1JV96_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10520.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0067398352101808-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000673s00024284.1PF00069.20Pkinase1093569.40E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.886
SRR1783600control10.778
SRR1783602moderate drought stress13.991
SRR1811619moderate drought stress13.790

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.582
DRR006520Root Summer glycyrrhizin high producing strain13.306
DRR006521Root Winter glycyrrhizin high producing strain15.893
DRR006522Root Winter glycyrrhizin high producing strain15.350
DRR006523Root Summer glycyrrhizin low producing strain16.599
DRR006524Root Summer glycyrrhizin low producing strain16.231
DRR006525Leaf Summer glycyrrhizin high producing strain8.560
DRR006526Leaf Summer glycyrrhizin high producing strain8.562

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.105
SRR2868004Drought Stress(Tissue:root)28.071
SRR2967015Control (Tissue:root)31.438

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.375
SRR9715740Leave16.230
SRR9715741Leave19.627
SRR9715739Root15.702
SRR9715742Root18.884
SRR9715743Root17.454

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.449
SRR8749028MeJA induced 9h30.876
SRR8749029MeJA induced 9h19.699
SRR8749030Uninduced15.064
SRR8749031Uninduced15.363
SRR8749032Uninduced16.723

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.817
SRR8400027Control-Root25.456

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved