Gene detail information of Glyur000674s00021150.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36990.16.00E-67heat shock factor 4
NRNP_001241597.13.81E-143heat shock factor [Glycine max]
Swissprottr|P22335|HSF24_SOLPE1.00E-94Heat shock factor protein HSF24
trEMBLtr|Q43457|Q43457_SOYBN1.00E-143Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006745266756091+


Gene family

Gene familysubfamily
Transcription Factors FamilyHSF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006302  double-strand break repair

GO:0006310  DNA recombination

GO:0006355  regulation of transcription, DNA-templated

GO:0009408  response to heat


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000674s00021150.1PF00447.12HSF_DNA-bind101011.80E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.419
SRR1783600control19.438
SRR1783602moderate drought stress34.182
SRR1811619moderate drought stress33.860

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain71.622
DRR006520Root Summer glycyrrhizin high producing strain70.558
DRR006521Root Winter glycyrrhizin high producing strain9.036
DRR006522Root Winter glycyrrhizin high producing strain8.456
DRR006523Root Summer glycyrrhizin low producing strain111.361
DRR006524Root Summer glycyrrhizin low producing strain110.405
DRR006525Leaf Summer glycyrrhizin high producing strain21.311
DRR006526Leaf Summer glycyrrhizin high producing strain20.699

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)90.164
SRR2868004Drought Stress(Tissue:root)195.348
SRR2967015Control (Tissue:root)194.905

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave166.865
SRR9715740Leave205.870
SRR9715741Leave224.625
SRR9715739Root97.708
SRR9715742Root237.479
SRR9715743Root219.056

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h290.197
SRR8749028MeJA induced 9h404.802
SRR8749029MeJA induced 9h462.720
SRR8749030Uninduced688.188
SRR8749031Uninduced659.960
SRR8749032Uninduced496.344

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root97.686
SRR8400027Control-Root91.513

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved