Gene detail information of Glyur000675s00024222.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64970.11.00E-107gamma-tocopherol methyltransferase
NRNP_001240883.11.09E-174tocopherol O-methyltransferase, chloroplastic-like [Glycine max]
COGYP_007073255.11.00E-73Tocopherol O-methyltransferase [Leptolyngbya sp. PCC 7376]
Swissprottr|Q6ZIK0|GTOMC_ORYSJ3.00E-148Probable tocopherol O-methyltransferase, chloroplastic (Precursor)
trEMBLtr|F8WRI5|F8WRI5_SOYBN4.00E-175Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G35680.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006753209935573-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05928E2.1.1.95 EC:2.1.1.95 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0008168  methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000675s00024222.1PF08241.7Methyltransf_111482173.10E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.502
SRR1783600control6.615
SRR1783602moderate drought stress9.668
SRR1811619moderate drought stress9.498

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.918
DRR006520Root Summer glycyrrhizin high producing strain20.271
DRR006521Root Winter glycyrrhizin high producing strain29.269
DRR006522Root Winter glycyrrhizin high producing strain28.278
DRR006523Root Summer glycyrrhizin low producing strain26.922
DRR006524Root Summer glycyrrhizin low producing strain27.402
DRR006525Leaf Summer glycyrrhizin high producing strain157.423
DRR006526Leaf Summer glycyrrhizin high producing strain157.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.643
SRR2868004Drought Stress(Tissue:root)50.606
SRR2967015Control (Tissue:root)44.984

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave141.370
SRR9715740Leave245.328
SRR9715741Leave121.371
SRR9715739Root15.777
SRR9715742Root17.625
SRR9715743Root15.791

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.209
SRR8749028MeJA induced 9h11.330
SRR8749029MeJA induced 9h12.241
SRR8749030Uninduced9.071
SRR8749031Uninduced5.349
SRR8749032Uninduced9.290

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.329
SRR8400027Control-Root14.402

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved