Gene detail information of Glyur000676s00021519.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13180.1 | 2.00E-17 | NAC domain containing protein 83 |
| NR | NP_001238078.1 | 6.61E-26 | NAC domain protein [Glycine max] |
| Swissprot | tr|Q8GY42|NAC25_ARATH | 2.00E-13 | NAC transcription factor 25 |
| trEMBL | tr|B2ZGQ7|B2ZGQ7_SOYBN | 2.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53954.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00676 | 3461 | 4481 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000676s00021519.1 | PF02365.10 | NAM | 14 | 50 | 8.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.353 |
| SRR1783600 | control | 54.018 |
| SRR1783602 | moderate drought stress | 94.258 |
| SRR1811619 | moderate drought stress | 90.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.968 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.973 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.936 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.014 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 119.733 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 122.343 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 105.132 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 106.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 240.750 |
| SRR2868004 | Drought Stress(Tissue:root) | 313.865 |
| SRR2967015 | Control (Tissue:root) | 255.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 47.685 |
| SRR9715740 | Leave | 58.653 |
| SRR9715741 | Leave | 72.454 |
| SRR9715739 | Root | 45.082 |
| SRR9715742 | Root | 56.905 |
| SRR9715743 | Root | 50.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 70.792 |
| SRR8749028 | MeJA induced 9h | 78.243 |
| SRR8749029 | MeJA induced 9h | 53.249 |
| SRR8749030 | Uninduced | 169.914 |
| SRR8749031 | Uninduced | 52.922 |
| SRR8749032 | Uninduced | 98.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 115.209 |
| SRR8400027 | Control-Root | 120.793 |