Gene detail information of Glyur000676s00021535.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39290.17.00E-84phosphatidylglycerolphosphate synthase 1
NRNP_001240075.11.15E-130uncharacterized protein LOC100779345 [Glycine max]
COGYP_004918718.14.00E-47CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Methylomicrobium alcaliphilum 20Z]
Swissprottr|O80952|PGPS1_ARATH5.00E-104CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic (Precursor)
trEMBLtr|C6TC70|C6TC70_SOYBN4.00E-131Putative uncharacterized protein {ECO:0000313|EMBL:ACU19422.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006769533698190+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00995pgsA, PGS1 EC:2.7.8.5 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0008654  phospholipid biosynthetic process


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0008444  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity

GO:0016780  phosphotransferase activity, for other substituted phosphate groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000676s00021535.1PF01066.16CDP-OH_P_transf271209.60E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.777
SRR1783600control3.865
SRR1783602moderate drought stress2.665
SRR1811619moderate drought stress2.535

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.366
DRR006520Root Summer glycyrrhizin high producing strain1.460
DRR006521Root Winter glycyrrhizin high producing strain0.316
DRR006522Root Winter glycyrrhizin high producing strain0.392
DRR006523Root Summer glycyrrhizin low producing strain1.411
DRR006524Root Summer glycyrrhizin low producing strain1.082
DRR006525Leaf Summer glycyrrhizin high producing strain1.218
DRR006526Leaf Summer glycyrrhizin high producing strain1.136

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.684
SRR2868004Drought Stress(Tissue:root)2.034
SRR2967015Control (Tissue:root)3.056

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.291
SRR9715740Leave1.192
SRR9715741Leave1.161
SRR9715739Root1.178
SRR9715742Root0.885
SRR9715743Root0.987

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.853
SRR8749028MeJA induced 9h4.363
SRR8749029MeJA induced 9h2.421
SRR8749030Uninduced1.089
SRR8749031Uninduced1.223
SRR8749032Uninduced0.541

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.739
SRR8400027Control-Root4.678

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved