Gene detail information of Glyur000677s00026174.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20830.18.00E-124AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_003539417.10PREDICTED: serine/threonine-protein kinase OXI1-like [Glycine max]
COGYP_005846680.12.00E-17Serine/threonine protein kinase [Ignavibacterium album JCM 16511]
Swissprottr|Q9LT38|UNCL_ARATH9.00E-161Serine/threonine-protein kinase UCNL {ECO:0000305}
trEMBLtr|I1LQH9|I1LQH9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05990.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006773359834863+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000677s00026174.1PF00069.20Pkinase181841.30E-36
Glyur000677s00026174.1PF00069.20Pkinase2413462.70E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.023
SRR1783600control1.924
SRR1783602moderate drought stress1.863
SRR1811619moderate drought stress1.735

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.805
DRR006520Root Summer glycyrrhizin high producing strain3.964
DRR006521Root Winter glycyrrhizin high producing strain0.127
DRR006522Root Winter glycyrrhizin high producing strain0.172
DRR006523Root Summer glycyrrhizin low producing strain2.514
DRR006524Root Summer glycyrrhizin low producing strain2.483
DRR006525Leaf Summer glycyrrhizin high producing strain2.529
DRR006526Leaf Summer glycyrrhizin high producing strain2.653

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.465
SRR2868004Drought Stress(Tissue:root)28.526
SRR2967015Control (Tissue:root)26.413

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.102
SRR9715740Leave1.467
SRR9715741Leave0.878
SRR9715739Root1.558
SRR9715742Root1.249
SRR9715743Root1.855

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.430
SRR8749028MeJA induced 9h0.338
SRR8749029MeJA induced 9h0.344
SRR8749030Uninduced0.050
SRR8749031Uninduced0.874
SRR8749032Uninduced0.652

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.298
SRR8400027Control-Root4.674

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved