Gene detail information of Glyur000679s00026729.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G09010.11.00E-106ascorbate peroxidase 4
NRXP_004490382.17.52E-178PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like isoform X1 [Cicer arietinum]
Swissprottr|Q9THX6|TL29_SOLLC7.00E-144Thylakoid lumenal 29 kDa protein, chloroplastic (Precursor)
trEMBLtr|V7B9T0|V7B9T0_PHAVU2.00E-175Uncharacterized protein {ECO:0000313|EMBL:ESW13206.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00679434910765-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00434E1.11.1.11 EC:1.11.1.11 Ascorbate and aldarate metabolism map00053
Glutathione metabolismmap00480


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000679s00026729.1PF00141.18peroxidase1383051.30E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.372
SRR1783600control0.363
SRR1783602moderate drought stress0.503
SRR1811619moderate drought stress0.469

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.795
DRR006520Root Summer glycyrrhizin high producing strain0.751
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.188
DRR006524Root Summer glycyrrhizin low producing strain0.233
DRR006525Leaf Summer glycyrrhizin high producing strain71.596
DRR006526Leaf Summer glycyrrhizin high producing strain69.976

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.841
SRR2868004Drought Stress(Tissue:root)2.445
SRR2967015Control (Tissue:root)2.656

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave48.398
SRR9715740Leave36.271
SRR9715741Leave26.388
SRR9715739Root0.473
SRR9715742Root0.328
SRR9715743Root0.300

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.227
SRR8749028MeJA induced 9h2.227
SRR8749029MeJA induced 9h2.201
SRR8749030Uninduced1.153
SRR8749031Uninduced0.433
SRR8749032Uninduced2.537

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.619
SRR8400027Control-Root3.092

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved