Gene detail information of Glyur000680s00022873.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G18870.12.00E-79Mitochondrial transcription termination factor family protein
NRXP_004493043.16.41E-164PREDICTED: uncharacterized protein LOC101492839 [Cicer arietinum]
trEMBLtr|K7MUL5|K7MUL5_SOYBN6.00E-148Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G48450.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006802603526883-


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000680s00022873.1PF02536.9mTERF802771.80E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.445
SRR1783600control1.382
SRR1783602moderate drought stress1.284
SRR1811619moderate drought stress1.351

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.859
DRR006520Root Summer glycyrrhizin high producing strain3.077
DRR006521Root Winter glycyrrhizin high producing strain1.428
DRR006522Root Winter glycyrrhizin high producing strain1.280
DRR006523Root Summer glycyrrhizin low producing strain2.911
DRR006524Root Summer glycyrrhizin low producing strain2.995
DRR006525Leaf Summer glycyrrhizin high producing strain23.573
DRR006526Leaf Summer glycyrrhizin high producing strain23.909

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.144
SRR2868004Drought Stress(Tissue:root)2.433
SRR2967015Control (Tissue:root)2.212

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.384
SRR9715740Leave11.545
SRR9715741Leave6.925
SRR9715739Root3.862
SRR9715742Root3.847
SRR9715743Root3.338

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.616
SRR8749028MeJA induced 9h0.680
SRR8749029MeJA induced 9h0.856
SRR8749030Uninduced0.327
SRR8749031Uninduced0.381
SRR8749032Uninduced0.552

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.604
SRR8400027Control-Root1.634

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved