Gene detail information of Glyur000680s00022887.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44730.1 | 2.00E-39 | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein |
| NR | XP_004492904.1 | 2.90E-160 | PREDICTED: uncharacterized protein LOC101501151 [Cicer arietinum] |
| Swissprot | tr|Q9LJG8|ASIL2_ARATH | 4.00E-15 | Trihelix transcription factor ASIL2 {ECO:0000305} |
| trEMBL | tr|V7B1A8|V7B1A8_PHAVU | 2.00E-126 | Uncharacterized protein {ECO:0000313|EMBL:ESW11667.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00680 | 105459 | 106499 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000680s00022887.1 | PF13837.1 | Myb_DNA-bind_4 | 37 | 133 | 3.40E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 79.995 |
| SRR1783600 | control | 79.005 |
| SRR1783602 | moderate drought stress | 114.340 |
| SRR1811619 | moderate drought stress | 113.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 82.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 80.650 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 67.330 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 66.726 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 103.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 104.055 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 52.741 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 52.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 68.744 |
| SRR2868004 | Drought Stress(Tissue:root) | 68.659 |
| SRR2967015 | Control (Tissue:root) | 82.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 41.835 |
| SRR9715740 | Leave | 47.800 |
| SRR9715741 | Leave | 57.606 |
| SRR9715739 | Root | 57.817 |
| SRR9715742 | Root | 62.978 |
| SRR9715743 | Root | 62.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.482 |
| SRR8749028 | MeJA induced 9h | 48.898 |
| SRR8749029 | MeJA induced 9h | 55.045 |
| SRR8749030 | Uninduced | 44.648 |
| SRR8749031 | Uninduced | 29.570 |
| SRR8749032 | Uninduced | 47.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 65.541 |
| SRR8400027 | Control-Root | 68.891 |