Gene detail information of Glyur000681s00027310.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73080.10PEP1 receptor 1
NRXP_003546285.20PREDICTED: receptor-like protein kinase-like [Glycine max]
COGYP_004775215.11.00E-57RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|P93194|RPK1_IPONI0Receptor-like protein kinase (Precursor)
trEMBLtr|I1MC87|I1MC87_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G00360.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006817487978314+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000681s00027310.1PF08263.7LRRNT_226656.50E-07
Glyur000681s00027310.1PF12799.2LRR_41431801.80E-07
Glyur000681s00027310.1PF13516.1LRR_62412640.39
Glyur000681s00027310.1PF13855.1LRR_84815418.80E-10
Glyur000681s00027310.1PF13855.1LRR_86316846.10E-07
Glyur000681s00027310.1PF00069.20Pkinase80710781.40E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.134
SRR1783600control0.155
SRR1783602moderate drought stress0.216
SRR1811619moderate drought stress0.237

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.033
DRR006520Root Summer glycyrrhizin high producing strain0.032
DRR006521Root Winter glycyrrhizin high producing strain0.034
DRR006522Root Winter glycyrrhizin high producing strain0.033
DRR006523Root Summer glycyrrhizin low producing strain0.067
DRR006524Root Summer glycyrrhizin low producing strain0.067
DRR006525Leaf Summer glycyrrhizin high producing strain0.453
DRR006526Leaf Summer glycyrrhizin high producing strain0.424

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.618
SRR2868004Drought Stress(Tissue:root)3.985
SRR2967015Control (Tissue:root)3.716

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.976
SRR9715740Leave1.001
SRR9715741Leave1.411
SRR9715739Root0.136
SRR9715742Root2.469
SRR9715743Root1.884

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.357
SRR8749028MeJA induced 9h5.011
SRR8749029MeJA induced 9h2.656
SRR8749030Uninduced1.630
SRR8749031Uninduced0.225
SRR8749032Uninduced0.232

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.749
SRR8400027Control-Root0.812

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved