Gene detail information of Glyur000682s00024325.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17420.16.00E-132NADPH-dependent thioredoxin reductase A
NRXP_004509471.10PREDICTED: thioredoxin reductase 2-like [Cicer arietinum]
COGYP_008712.19.00E-131thioredoxin-disulfide reductase 2 [Candidatus Protochlamydia amoebophila UWE25]
Swissprottr|Q39242|TRXB2_ARATH0Thioredoxin reductase 2
trEMBLtr|I1MMU1|I1MMU1_SOYBN0Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0068299510102965-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00384trxB EC:1.8.1.9 Pyrimidine metabolism map00240
Selenocompound metabolismmap00450


Gene Ontology

biological_process

GO:0019430  removal of superoxide radicals

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0004791  thioredoxin-disulfide reductase activity

GO:0016491  oxidoreductase activity

GO:0050660  flavin adenine dinucleotide binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000682s00024325.1PF07992.9Pyr_redox_2843763.30E-25
Glyur000682s00024325.1PF00070.22Pyr_redox2363011.80E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.357
SRR1783600control12.611
SRR1783602moderate drought stress9.774
SRR1811619moderate drought stress10.143

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.302
DRR006520Root Summer glycyrrhizin high producing strain10.649
DRR006521Root Winter glycyrrhizin high producing strain11.438
DRR006522Root Winter glycyrrhizin high producing strain11.218
DRR006523Root Summer glycyrrhizin low producing strain20.067
DRR006524Root Summer glycyrrhizin low producing strain20.093
DRR006525Leaf Summer glycyrrhizin high producing strain3.975
DRR006526Leaf Summer glycyrrhizin high producing strain3.960

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.426
SRR2868004Drought Stress(Tissue:root)10.025
SRR2967015Control (Tissue:root)8.777

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.937
SRR9715740Leave4.174
SRR9715741Leave4.654
SRR9715739Root15.281
SRR9715742Root13.624
SRR9715743Root11.035

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.578
SRR8749028MeJA induced 9h9.716
SRR8749029MeJA induced 9h10.035
SRR8749030Uninduced5.434
SRR8749031Uninduced3.607
SRR8749032Uninduced6.115

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.593
SRR8400027Control-Root15.238

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved