Gene detail information of Glyur000682s00024327.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63870.24.00E-169serine/threonine phosphatase 7
NRXP_003534225.10PREDICTED: serine/threonine-protein phosphatase 7-like [Glycine max]
COGYP_004458109.13.00E-24metallophosphoesterase [Acidianus hospitalis W1]
Swissprottr|Q9FN02|PPP7_ARATH0Serine/threonine-protein phosphatase 7
trEMBLtr|K7LEW3|K7LEW3_SOYBN0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00682109791116327+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04460PPP5C EC:3.1.3.16 MAPK signaling pathway map04010


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000682s00024327.1PF00149.23Metallophos1343602.20E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.018
SRR1783600control19.461
SRR1783602moderate drought stress14.733
SRR1811619moderate drought stress15.217

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.729
DRR006520Root Summer glycyrrhizin high producing strain17.558
DRR006521Root Winter glycyrrhizin high producing strain10.540
DRR006522Root Winter glycyrrhizin high producing strain9.824
DRR006523Root Summer glycyrrhizin low producing strain15.878
DRR006524Root Summer glycyrrhizin low producing strain16.556
DRR006525Leaf Summer glycyrrhizin high producing strain11.529
DRR006526Leaf Summer glycyrrhizin high producing strain11.260

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.170
SRR2868004Drought Stress(Tissue:root)21.024
SRR2967015Control (Tissue:root)20.192

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.393
SRR9715740Leave17.680
SRR9715741Leave19.732
SRR9715739Root16.020
SRR9715742Root22.142
SRR9715743Root20.350

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.102
SRR8749028MeJA induced 9h9.708
SRR8749029MeJA induced 9h7.012
SRR8749030Uninduced4.057
SRR8749031Uninduced1.719
SRR8749032Uninduced1.833

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.157
SRR8400027Control-Root23.753

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved