Gene detail information of Glyur000683s00025149.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40260.1 | 2.00E-19 | Homeodomain-like superfamily protein |
| NR | XP_003553155.2 | 3.94E-33 | PREDICTED: putative Myb family transcription factor At1g14600-like [Glycine max] |
| Swissprot | tr|Q700D9|MYBF_ARATH | 6.00E-22 | Putative Myb family transcription factor At1g14600 |
| trEMBL | tr|K7MRD0|K7MRD0_SOYBN | 1.00E-33 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G14071.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00683 | 62873 | 63462 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| Carbohydrate-Active enzymes Family | GT77 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000683s00025149.1 | PF00249.26 | Myb_DNA-binding | 22 | 71 | 7.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.969 |
| SRR1783600 | control | 1.418 |
| SRR1783602 | moderate drought stress | 2.001 |
| SRR1811619 | moderate drought stress | 1.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.114 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.181 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.125 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.880 |
| SRR2967015 | Control (Tissue:root) | 3.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.618 |
| SRR9715740 | Leave | 3.783 |
| SRR9715741 | Leave | 12.169 |
| SRR9715739 | Root | 0.778 |
| SRR9715742 | Root | 0.235 |
| SRR9715743 | Root | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 50.661 |
| SRR8749028 | MeJA induced 9h | 166.202 |
| SRR8749029 | MeJA induced 9h | 99.092 |
| SRR8749030 | Uninduced | 137.777 |
| SRR8749031 | Uninduced | 193.404 |
| SRR8749032 | Uninduced | 128.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.552 |
| SRR8400027 | Control-Root | 3.099 |