Gene detail information of Glyur000683s00025153.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07900.1 | 2.00E-17 | Mitochondrial transcription termination factor family protein |
| NR | KHM99666.1 | 8.44E-58 | hypothetical protein glysoja_006509 [Glycine soja] |
| trEMBL | tr|I1KXX6|I1KXX6_SOYBN | 2.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G41780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00683 | 83930 | 85618 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000683s00025153.1 | PF02536.9 | mTERF | 86 | 160 | 3.40E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.572 |
| SRR1783600 | control | 2.934 |
| SRR1783602 | moderate drought stress | 4.865 |
| SRR1811619 | moderate drought stress | 4.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.693 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.627 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.066 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.781 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.110 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.444 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.108 |
| SRR2967015 | Control (Tissue:root) | 3.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.149 |
| SRR9715740 | Leave | 2.567 |
| SRR9715741 | Leave | 3.203 |
| SRR9715739 | Root | 3.530 |
| SRR9715742 | Root | 4.077 |
| SRR9715743 | Root | 3.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.003 |
| SRR8749028 | MeJA induced 9h | 1.240 |
| SRR8749029 | MeJA induced 9h | 0.439 |
| SRR8749030 | Uninduced | 3.262 |
| SRR8749031 | Uninduced | 0.043 |
| SRR8749032 | Uninduced | 2.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.425 |
| SRR8400027 | Control-Root | 6.656 |