Gene detail information of Glyur000683s00025160.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30860.11.00E-78glutathione S-transferase PHI 9
NRXP_007146198.11.65E-141hypothetical protein PHAVU_006G020800g [Phaseolus vulgaris]
COGYP_008152065.13.00E-47glutathione S-transferase [Sorangium cellulosum So0157-2]
Swissprottr|O80852|GSTF9_ARATH3.00E-98Glutathione S-transferase F9
trEMBLtr|V7BJR0|V7BJR0_PHAVU6.00E-142Uncharacterized protein {ECO:0000313|EMBL:ESW18192.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00683124640126394-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000683s00025160.1PF13417.1GST_N_314807.10E-13
Glyur000683s00025160.1PF00043.20GST_C1142027.50E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control656.926
SRR1783600control659.937
SRR1783602moderate drought stress489.354
SRR1811619moderate drought stress487.476

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3953.092
DRR006520Root Summer glycyrrhizin high producing strain3913.328
DRR006521Root Winter glycyrrhizin high producing strain827.016
DRR006522Root Winter glycyrrhizin high producing strain804.258
DRR006523Root Summer glycyrrhizin low producing strain712.310
DRR006524Root Summer glycyrrhizin low producing strain712.644
DRR006525Leaf Summer glycyrrhizin high producing strain185.218
DRR006526Leaf Summer glycyrrhizin high producing strain185.385

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1334.244
SRR2868004Drought Stress(Tissue:root)1247.027
SRR2967015Control (Tissue:root)964.530

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave198.746
SRR9715740Leave238.104
SRR9715741Leave224.256
SRR9715739Root1269.470
SRR9715742Root762.714
SRR9715743Root881.304

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h389.995
SRR8749028MeJA induced 9h366.517
SRR8749029MeJA induced 9h414.791
SRR8749030Uninduced277.313
SRR8749031Uninduced169.373
SRR8749032Uninduced330.964

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root859.307
SRR8400027Control-Root1027.157

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved