Gene detail information of Glyur000683s00025161.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30860.1 | 8.00E-80 | glutathione S-transferase PHI 9 |
| NR | KEH33687.1 | 2.62E-144 | glutathione S-transferase, amino-terminal domain protein [Medicago truncatula] |
| COG | YP_008152065.1 | 9.00E-44 | glutathione S-transferase [Sorangium cellulosum So0157-2] |
| Swissprot | tr|O80852|GSTF9_ARATH | 6.00E-100 | Glutathione S-transferase F9 |
| trEMBL | tr|A0A072UVM9|A0A072UVM9_MEDTR | 1.00E-144 | Glutathione S-transferase, amino-terminal domain protein {ECO:0000313|EMBL:KEH33687.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00683 | 128811 | 129877 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000683s00025161.1 | PF13417.1 | GST_N_3 | 14 | 79 | 2.00E-12 |
| Glyur000683s00025161.1 | PF00043.20 | GST_C | 128 | 202 | 3.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.027 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.164 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.072 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.005 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.206 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.035 |
| SRR9715742 | Root | 0.003 |
| SRR9715743 | Root | 0.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.115 |
| SRR8749028 | MeJA induced 9h | 0.103 |
| SRR8749029 | MeJA induced 9h | 0.021 |
| SRR8749030 | Uninduced | 0.253 |
| SRR8749031 | Uninduced | 0.227 |
| SRR8749032 | Uninduced | 0.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.001 |
| SRR8400027 | Control-Root | 0.112 |