Gene detail information of Glyur000688s00027120.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G32130.12.00E-148Transcription elongation factor (TFIIS) family protein
NRXP_007158233.10hypothetical protein PHAVU_002G135200g [Phaseolus vulgaris]
trEMBLtr|V7CJ79|V7CJ79_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW30227.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006882614831486-


Gene family

Gene familysubfamily
Transcription Factors FamilyIWS1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000688s00027120.1PF08711.6Med263213797.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control77.506
SRR1783600control77.753
SRR1783602moderate drought stress92.605
SRR1811619moderate drought stress91.005

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain114.839
DRR006520Root Summer glycyrrhizin high producing strain112.729
DRR006521Root Winter glycyrrhizin high producing strain246.621
DRR006522Root Winter glycyrrhizin high producing strain238.499
DRR006523Root Summer glycyrrhizin low producing strain95.238
DRR006524Root Summer glycyrrhizin low producing strain94.957
DRR006525Leaf Summer glycyrrhizin high producing strain76.156
DRR006526Leaf Summer glycyrrhizin high producing strain75.583

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)141.995
SRR2868004Drought Stress(Tissue:root)160.260
SRR2967015Control (Tissue:root)175.755

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.355
SRR9715740Leave84.682
SRR9715741Leave91.197
SRR9715739Root31.451
SRR9715742Root80.128
SRR9715743Root75.365

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h91.714
SRR8749028MeJA induced 9h162.514
SRR8749029MeJA induced 9h132.074
SRR8749030Uninduced181.276
SRR8749031Uninduced268.997
SRR8749032Uninduced240.439

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root146.641
SRR8400027Control-Root152.546

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved