Gene detail information of Glyur000689s00031829.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G20980.10squamosa promoter binding protein-like 14
NRXP_004498230.10PREDICTED: uncharacterized protein LOC101506418 [Cicer arietinum]
Swissprottr|Q8RY95|SPL14_ARATH0Squamosa promoter-binding-like protein 14
trEMBLtr|G7IA23|G7IA23_MEDTR0Squamosa promoter-binding-like protein {ECO:0000313|EMBL:AES59934.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006891803325708+


Gene family

Gene familysubfamily
Transcription Factors FamilySBP
EAR motif-containing ProteinsSBP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000689s00031829.1PF03110.9SBP1131906.90E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.983
SRR1783600control20.229
SRR1783602moderate drought stress22.625
SRR1811619moderate drought stress22.570

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.128
DRR006520Root Summer glycyrrhizin high producing strain22.143
DRR006521Root Winter glycyrrhizin high producing strain37.660
DRR006522Root Winter glycyrrhizin high producing strain36.198
DRR006523Root Summer glycyrrhizin low producing strain37.491
DRR006524Root Summer glycyrrhizin low producing strain37.553
DRR006525Leaf Summer glycyrrhizin high producing strain16.763
DRR006526Leaf Summer glycyrrhizin high producing strain16.553

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.945
SRR2868004Drought Stress(Tissue:root)57.358
SRR2967015Control (Tissue:root)58.492

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.990
SRR9715740Leave25.564
SRR9715741Leave34.386
SRR9715739Root10.380
SRR9715742Root35.834
SRR9715743Root30.679

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.654
SRR8749028MeJA induced 9h26.655
SRR8749029MeJA induced 9h20.398
SRR8749030Uninduced37.913
SRR8749031Uninduced31.201
SRR8749032Uninduced27.312

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.215
SRR8400027Control-Root40.245

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved