Gene detail information of Glyur000690s00025164.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02870.1 | 3.00E-113 | Inositol monophosphatase family protein |
| NR | KHN32960.1 | 0 | Inositol monophosphatase 3 [Glycine soja] |
| COG | YP_003710106.1 | 2.00E-58 | monophosphatase [Waddlia chondrophila WSU 86-1044] |
| Swissprot | tr|P54928|IMP3_SOLLC | 3.00E-154 | Inositol monophosphatase 3 |
| trEMBL | tr|I1MFP3|I1MFP3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G12230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00690 | 14906 | 19140 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10047 | VTC4 | EC:3.1.3.25 3.1.3.93 | Ascorbate and aldarate metabolism | map00053 |
| Inositol phosphate metabolism | map00562 | |||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000690s00025164.1 | PF00459.20 | Inositol_P | 38 | 299 | 1.20E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.025 |
| SRR1783600 | control | 10.385 |
| SRR1783602 | moderate drought stress | 10.669 |
| SRR1811619 | moderate drought stress | 10.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.454 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.012 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.867 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.724 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.085 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.213 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.379 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 27.798 |
| SRR2868004 | Drought Stress(Tissue:root) | 28.263 |
| SRR2967015 | Control (Tissue:root) | 23.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.599 |
| SRR9715740 | Leave | 16.634 |
| SRR9715741 | Leave | 13.660 |
| SRR9715739 | Root | 7.172 |
| SRR9715742 | Root | 10.367 |
| SRR9715743 | Root | 9.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.857 |
| SRR8749028 | MeJA induced 9h | 6.427 |
| SRR8749029 | MeJA induced 9h | 8.420 |
| SRR8749030 | Uninduced | 5.856 |
| SRR8749031 | Uninduced | 3.870 |
| SRR8749032 | Uninduced | 4.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 21.984 |
| SRR8400027 | Control-Root | 24.001 |