Gene detail information of Glyur000690s00025170.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17230.1 | 0 | SCARECROW-like 13 |
| NR | XP_004507608.1 | 0 | PREDICTED: scarecrow-like protein 13-like [Cicer arietinum] |
| Swissprot | tr|Q9M0M5|SCL13_ARATH | 0 | Scarecrow-like protein 13 |
| trEMBL | tr|I1MQZ7|I1MQZ7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00690 | 56215 | 57747 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000690s00025170.1 | PF03514.9 | GRAS | 140 | 510 | 1.90E-124 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.116 |
| SRR1783600 | control | 9.430 |
| SRR1783602 | moderate drought stress | 8.589 |
| SRR1811619 | moderate drought stress | 8.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 97.581 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 95.555 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 54.517 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.407 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 120.360 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 115.918 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.198 |
| SRR2868004 | Drought Stress(Tissue:root) | 29.076 |
| SRR2967015 | Control (Tissue:root) | 179.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 98.326 |
| SRR9715740 | Leave | 116.262 |
| SRR9715741 | Leave | 100.434 |
| SRR9715739 | Root | 237.835 |
| SRR9715742 | Root | 417.493 |
| SRR9715743 | Root | 394.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 129.927 |
| SRR8749028 | MeJA induced 9h | 132.730 |
| SRR8749029 | MeJA induced 9h | 117.503 |
| SRR8749030 | Uninduced | 50.991 |
| SRR8749031 | Uninduced | 25.544 |
| SRR8749032 | Uninduced | 59.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 41.684 |
| SRR8400027 | Control-Root | 103.904 |