Gene detail information of Glyur000691s00031271.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01840.1 | 2.00E-114 | Protein kinase superfamily protein |
| NR | KHN24899.1 | 0 | Receptor-like serine/threonine-protein kinase NCRK [Glycine soja] |
| COG | YP_005004992.1 | 8.00E-15 | phosphotransferase enzyme family protein [Pediococcus claussenii ATCC BAA-344] |
| Swissprot | tr|Q9SGI7|LYK2_ARATH | 2.00E-148 | Protein LYK2 (Precursor) |
| trEMBL | tr|I1N7P2|I1N7P2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G25260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00691 | 79498 | 81594 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.1.3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000691s00031271.1 | PF01476.15 | LysM | 186 | 218 | 3.60E-07 |
| Glyur000691s00031271.1 | PF00069.20 | Pkinase | 386 | 663 | 1.30E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.295 |
| SRR1783600 | control | 0.298 |
| SRR1783602 | moderate drought stress | 1.338 |
| SRR1811619 | moderate drought stress | 1.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.595 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.437 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.949 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.805 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.080 |
| SRR2967015 | Control (Tissue:root) | 0.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.966 |
| SRR9715743 | Root | 0.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.186 |
| SRR8400027 | Control-Root | 0.383 |