Gene detail information of Glyur000692s00016554.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64950.1 | 4.00E-53 | Mitochondrial transcription termination factor family protein |
| NR | XP_004513235.1 | 3.03E-134 | PREDICTED: uncharacterized protein LOC101504025 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1KS49|I1KS49_SOYBN | 3.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G11270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00692 | 72769 | 74663 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000692s00016554.1 | PF02536.9 | mTERF | 81 | 125 | 8.20E-07 |
| Glyur000692s00016554.1 | PF02536.9 | mTERF | 88 | 350 | 9.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.637 |
| SRR1783600 | control | 5.659 |
| SRR1783602 | moderate drought stress | 5.973 |
| SRR1811619 | moderate drought stress | 5.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.554 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.780 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.793 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.917 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.054 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.803 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.197 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.151 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.363 |
| SRR2967015 | Control (Tissue:root) | 8.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.411 |
| SRR9715740 | Leave | 10.360 |
| SRR9715741 | Leave | 6.176 |
| SRR9715739 | Root | 1.791 |
| SRR9715742 | Root | 3.163 |
| SRR9715743 | Root | 3.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.531 |
| SRR8749028 | MeJA induced 9h | 6.338 |
| SRR8749029 | MeJA induced 9h | 6.972 |
| SRR8749030 | Uninduced | 3.636 |
| SRR8749031 | Uninduced | 1.965 |
| SRR8749032 | Uninduced | 1.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.907 |
| SRR8400027 | Control-Root | 9.169 |