Gene detail information of Glyur000693s00025745.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03250.13.00E-32UDP-GLUCOSE PYROPHOSPHORYLASE 1
NRAAL33919.14.91E-40UDP-glucose pyrophosphorylase [Amorpha fruticosa]
COGYP_001878340.11.00E-07UTP--glucose-1-phosphate uridylyltransferase [Akkermansia muciniphila ATCC BAA-835]
Swissprottr|Q9LKG7|UGPA_ASTPN1.00E-41UTP--glucose-1-phosphate uridylyltransferase
trEMBLtr|Q8W557|Q8W557_9FABA2.00E-40UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:AAL33919.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006935380156810-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00963UGP2, galU, galF EC:2.7.7.9 Pentose and glucuronate interconversions map00040
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006011  UDP-glucose metabolic process

GO:0008152  metabolic process


molecular_function

GO:0003983  UTP:glucose-1-phosphate uridylyltransferase activity

GO:0070569  uridylyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000693s00025745.1PF01704.13UDPGP1277.00E-06
Glyur000693s00025745.1PF01704.13UDPGP35741.10E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.389
SRR1783600control11.448
SRR1783602moderate drought stress21.617
SRR1811619moderate drought stress22.035

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.364
DRR006520Root Summer glycyrrhizin high producing strain2.800
DRR006521Root Winter glycyrrhizin high producing strain1.438
DRR006522Root Winter glycyrrhizin high producing strain0.880
DRR006523Root Summer glycyrrhizin low producing strain10.530
DRR006524Root Summer glycyrrhizin low producing strain8.547
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.528
SRR2868004Drought Stress(Tissue:root)9.008
SRR2967015Control (Tissue:root)5.596

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.875
SRR9715740Leave4.246
SRR9715741Leave3.822
SRR9715739Root2.419
SRR9715742Root6.721
SRR9715743Root4.087

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.164
SRR8749028MeJA induced 9h1.498
SRR8749029MeJA induced 9h1.533
SRR8749030Uninduced1.325
SRR8749031Uninduced0.350
SRR8749032Uninduced0.211

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.880
SRR8400027Control-Root32.794

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved