Gene detail information of Glyur000693s00025758.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65910.1 | 5.00E-46 | NAC domain containing protein 28 |
| NR | XP_003544352.1 | 0 | PREDICTED: protein FEZ-like [Glycine max] |
| Swissprot | tr|A4VCM0|NAC45_ARATH | 4.00E-07 | NAC domain-containing protein 45 {ECO:0000312|EMBL:AEE73912.1} |
| trEMBL | tr|I1MBR0|I1MBR0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G39080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00693 | 112590 | 114917 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.093 |
| SRR1783600 | control | 0.112 |
| SRR1783602 | moderate drought stress | 0.096 |
| SRR1811619 | moderate drought stress | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.489 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.451 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.353 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.102 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.670 |
| SRR2967015 | Control (Tissue:root) | 2.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.314 |
| SRR9715740 | Leave | 0.004 |
| SRR9715741 | Leave | 0.082 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.353 |
| SRR9715743 | Root | 0.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.134 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.794 |
| SRR8400027 | Control-Root | 0.537 |