Gene detail information of Glyur000693s00025759.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73370.10sucrose synthase 6
NRAES99124.20sucrose synthase [Medicago truncatula]
COGYP_003529337.10sucrose synthase [Nitrosococcus halophilus Nc 4]
Swissprottr|Q9FX32|SUS6_ARATH0Sucrose synthase 6
trEMBLtr|G7KFT7|G7KFT7_MEDTR0Sucrose synthase {ECO:0000313|EMBL:AES99124.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00693118374125114-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00695E2.4.1.13 EC:2.4.1.13 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005985  sucrose metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0016157  sucrose synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000693s00025759.1PF00862.14Sucrose_synth95332.00E-192
Glyur000693s00025759.1PF00534.15Glycos_transf_15467083.30E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.063
SRR1783600control2.079
SRR1783602moderate drought stress1.916
SRR1811619moderate drought stress1.915

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.813
DRR006520Root Summer glycyrrhizin high producing strain4.924
DRR006521Root Winter glycyrrhizin high producing strain2.125
DRR006522Root Winter glycyrrhizin high producing strain2.098
DRR006523Root Summer glycyrrhizin low producing strain7.720
DRR006524Root Summer glycyrrhizin low producing strain7.914
DRR006525Leaf Summer glycyrrhizin high producing strain4.519
DRR006526Leaf Summer glycyrrhizin high producing strain4.639

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.187
SRR2868004Drought Stress(Tissue:root)14.235
SRR2967015Control (Tissue:root)12.940

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.029
SRR9715740Leave0.771
SRR9715741Leave1.201
SRR9715739Root0.275
SRR9715742Root3.001
SRR9715743Root2.602

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.151
SRR8749028MeJA induced 9h0.026
SRR8749029MeJA induced 9h0.209
SRR8749030Uninduced0.089
SRR8749031Uninduced0.059
SRR8749032Uninduced0.110

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.441
SRR8400027Control-Root4.034

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved