Gene detail information of Glyur000694s00023248.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04030.3 | 3.00E-97 | Homeodomain-like superfamily protein |
| NR | XP_003540247.1 | 0 | PREDICTED: uncharacterized protein LOC100810396 [Glycine max] |
| Swissprot | tr|Q9SAK5|APL_ARATH | 2.00E-50 | Myb family transcription factor APL |
| trEMBL | tr|I1LTV8|I1LTV8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G31020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00694 | 43818 | 46898 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000694s00023248.1 | PF00249.26 | Myb_DNA-binding | 49 | 100 | 8.40E-17 |
| Glyur000694s00023248.1 | PF14379.1 | Myb_CC_LHEQLE | 152 | 200 | 1.10E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.787 |
| SRR1783600 | control | 3.724 |
| SRR1783602 | moderate drought stress | 7.467 |
| SRR1811619 | moderate drought stress | 7.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.927 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.422 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.045 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.248 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.050 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.189 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.948 |
| SRR2967015 | Control (Tissue:root) | 12.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.821 |
| SRR9715740 | Leave | 17.909 |
| SRR9715741 | Leave | 12.739 |
| SRR9715739 | Root | 0.166 |
| SRR9715742 | Root | 3.231 |
| SRR9715743 | Root | 2.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.031 |
| SRR8749030 | Uninduced | 0.351 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.659 |
| SRR8400027 | Control-Root | 6.580 |