Gene detail information of Glyur000694s00023251.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08320.31.00E-148bZIP transcription factor family protein
NRXP_003539469.10PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like isoform X1 [Glycine max]
Swissprottr|O24160|TGA21_TOBAC1.00E-123TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBLtr|K7LVR2|K7LVR2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G30990.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006946045368967+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000694s00023251.1PF00170.16bZIP_12002416.40E-08
Glyur000694s00023251.1PF14144.1DOG12813582.80E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.125
SRR1783600control2.173
SRR1783602moderate drought stress2.469
SRR1811619moderate drought stress2.358

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.313
DRR006520Root Summer glycyrrhizin high producing strain9.150
DRR006521Root Winter glycyrrhizin high producing strain14.951
DRR006522Root Winter glycyrrhizin high producing strain14.271
DRR006523Root Summer glycyrrhizin low producing strain14.462
DRR006524Root Summer glycyrrhizin low producing strain14.722
DRR006525Leaf Summer glycyrrhizin high producing strain0.190
DRR006526Leaf Summer glycyrrhizin high producing strain0.189

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.971
SRR2868004Drought Stress(Tissue:root)40.712
SRR2967015Control (Tissue:root)40.325

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.218
SRR9715740Leave0.117
SRR9715741Leave0.240
SRR9715739Root1.484
SRR9715742Root5.266
SRR9715743Root4.384

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.979
SRR8749028MeJA induced 9h19.228
SRR8749029MeJA induced 9h7.561
SRR8749030Uninduced20.190
SRR8749031Uninduced11.411
SRR8749032Uninduced10.054

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.963
SRR8400027Control-Root13.729

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved