Gene detail information of Glyur000695s00020660.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04720.19.00E-48pathogenesis-related 4
NRNP_001235941.13.29E-81uncharacterized protein LOC100526916 precursor [Glycine max]
Swissprottr|P29062|PR4A_TOBAC2.00E-63Pathogenesis-related protein PR-4A (Precursor)
trEMBLtr|C6T2R0|C6T2R0_SOYBN1.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G40770.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006954578046605-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM18


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0042742  defense response to bacterium

GO:0050832  defense response to fungus



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000695s00020660.1PF00967.12Barwin221316.20E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control69.663
SRR1783600control69.287
SRR1783602moderate drought stress104.925
SRR1811619moderate drought stress104.144

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.203
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain21.690
DRR006526Leaf Summer glycyrrhizin high producing strain21.730

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)81.694
SRR2868004Drought Stress(Tissue:root)15.729
SRR2967015Control (Tissue:root)3.184

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave235.260
SRR9715740Leave141.401
SRR9715741Leave220.288
SRR9715739Root208.427
SRR9715742Root107.739
SRR9715743Root124.364

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h66.843
SRR8749028MeJA induced 9h302.172
SRR8749029MeJA induced 9h269.410
SRR8749030Uninduced3593.784
SRR8749031Uninduced3625.887
SRR8749032Uninduced1732.275

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root261.092
SRR8400027Control-Root226.208

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved