Gene detail information of Glyur000695s00020661.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04720.12.00E-73pathogenesis-related 4
NRXP_004494704.12.82E-125PREDICTED: hevein-like preproprotein-like [Cicer arietinum]
Swissprottr|P02877|HEVE_HEVBR2.00E-102Win-like protein (Precursor)
trEMBLtr|C6T035|C6T035_SOYBN3.00E-124Putative uncharacterized protein {ECO:0000313|EMBL:ACU14858.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006954803249851-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM18


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0042742  defense response to bacterium

GO:0050832  defense response to fungus


molecular_function

GO:0008061  chitin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000695s00020661.1PF00187.14Chitin_bind_122635.00E-18
Glyur000695s00020661.1PF00967.12Barwin731914.50E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.279
SRR1783600control5.001
SRR1783602moderate drought stress9.957
SRR1811619moderate drought stress9.912

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.168
DRR006520Root Summer glycyrrhizin high producing strain1.138
DRR006521Root Winter glycyrrhizin high producing strain6.543
DRR006522Root Winter glycyrrhizin high producing strain6.415
DRR006523Root Summer glycyrrhizin low producing strain0.643
DRR006524Root Summer glycyrrhizin low producing strain0.576
DRR006525Leaf Summer glycyrrhizin high producing strain29.677
DRR006526Leaf Summer glycyrrhizin high producing strain29.503

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)101.115
SRR2868004Drought Stress(Tissue:root)123.802
SRR2967015Control (Tissue:root)98.662

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave328.306
SRR9715740Leave60.488
SRR9715741Leave210.522
SRR9715739Root38.282
SRR9715742Root74.354
SRR9715743Root67.410

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h114.106
SRR8749028MeJA induced 9h186.193
SRR8749029MeJA induced 9h156.968
SRR8749030Uninduced506.807
SRR8749031Uninduced477.400
SRR8749032Uninduced671.704

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root76.542
SRR8400027Control-Root62.610

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved