Gene detail information of Glyur000695s00020670.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G28770.2 | 3.00E-64 | bZIP transcription factor family protein |
| NR | KHN31462.1 | 5.79E-165 | Light-inducible protein CPRF2 [Glycine soja] |
| Swissprot | tr|Q99090|CPRF2_PETCR | 3.00E-119 | Light-inducible protein CPRF2 |
| trEMBL | tr|I1JRM9|I1JRM9_SOYBN | 3.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G40730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00695 | 80094 | 84055 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000695s00020670.1 | PF00170.16 | bZIP_1 | 200 | 254 | 1.20E-14 |
| Glyur000695s00020670.1 | PF12498.3 | bZIP_C | 269 | 401 | 1.00E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.821 |
| SRR1783600 | control | 2.712 |
| SRR1783602 | moderate drought stress | 3.090 |
| SRR1811619 | moderate drought stress | 3.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.531 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.545 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.945 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.761 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.401 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.534 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.754 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.510 |
| SRR2868004 | Drought Stress(Tissue:root) | 128.044 |
| SRR2967015 | Control (Tissue:root) | 239.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 30.792 |
| SRR9715740 | Leave | 28.629 |
| SRR9715741 | Leave | 38.354 |
| SRR9715739 | Root | 0.988 |
| SRR9715742 | Root | 5.369 |
| SRR9715743 | Root | 4.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.039 |
| SRR8749028 | MeJA induced 9h | 85.254 |
| SRR8749029 | MeJA induced 9h | 66.396 |
| SRR8749030 | Uninduced | 54.521 |
| SRR8749031 | Uninduced | 343.240 |
| SRR8749032 | Uninduced | 192.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.065 |
| SRR8400027 | Control-Root | 15.694 |