Gene detail information of Glyur000696s00018524.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24330.1 | 9.00E-131 | ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 |
| NR | XP_003552669.1 | 0 | PREDICTED: histone-lysine N-methyltransferase ATXR6-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9FNE9|ATXR6_ARATH | 2.00E-171 | Histone-lysine N-methyltransferase ATXR6 |
| trEMBL | tr|I1N521|I1N521_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00696 | 112750 | 115412 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PHD |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000696s00018524.1 | PF00628.24 | PHD | 34 | 81 | 5.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.095 |
| SRR1783600 | control | 2.093 |
| SRR1783602 | moderate drought stress | 0.588 |
| SRR1811619 | moderate drought stress | 0.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.524 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.452 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.579 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.529 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.486 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.945 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.655 |
| SRR2967015 | Control (Tissue:root) | 2.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.236 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.275 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.336 |
| SRR9715743 | Root | 0.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.847 |
| SRR8749028 | MeJA induced 9h | 2.322 |
| SRR8749029 | MeJA induced 9h | 0.942 |
| SRR8749030 | Uninduced | 0.055 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.988 |
| SRR8400027 | Control-Root | 1.635 |