Gene detail information of Glyur000698s00016568.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01720.1 | 4.00E-15 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| NR | BAG50066.1 | 1.47E-51 | transcription factor NAC [Lotus japonicus] |
| Swissprot | tr|Q39013|NAC2_ARATH | 5.00E-22 | NAC domain-containing protein 2 |
| trEMBL | tr|B3IX39|B3IX39_LOTJA | 5.00E-52 | Uncharacterized protein {ECO:0000313|EMBL:AFK45786.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00698 | 5766 | 8587 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000698s00016568.1 | PF02365.10 | NAM | 89 | 118 | 1.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.738 |
| SRR1783600 | control | 0.723 |
| SRR1783602 | moderate drought stress | 1.294 |
| SRR1811619 | moderate drought stress | 1.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.275 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.832 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.766 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 60.195 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.175 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 84.104 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 83.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.722 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.024 |
| SRR2967015 | Control (Tissue:root) | 7.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 215.949 |
| SRR9715740 | Leave | 101.150 |
| SRR9715741 | Leave | 231.473 |
| SRR9715739 | Root | 15.122 |
| SRR9715742 | Root | 80.218 |
| SRR9715743 | Root | 37.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.421 |
| SRR8749028 | MeJA induced 9h | 95.700 |
| SRR8749029 | MeJA induced 9h | 47.892 |
| SRR8749030 | Uninduced | 41.712 |
| SRR8749031 | Uninduced | 70.461 |
| SRR8749032 | Uninduced | 83.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.669 |
| SRR8400027 | Control-Root | 9.171 |