Gene detail information of Glyur000698s00016570.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G34240.10aldehyde dehydrogenase 3I1
NRXP_003532071.10PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max]
COGYP_004468471.13.00E-149NAD-dependent aldehyde dehydrogenase [Alteromonas sp. SN2]
Swissprottr|Q8W033|AL3I1_ARATH0Aldehyde dehydrogenase family 3 member I1, chloroplastic (Precursor)
trEMBLtr|I1KNX5|I1KNX5_SOYBN0Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006981342920615-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00128ALDH EC:1.2.1.3 Glycolysis / Gluconeogenesis map00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625


Gene Ontology

biological_process

GO:0006081  cellular aldehyde metabolic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004030  aldehyde dehydrogenase [NAD(P)+] activity

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000698s00016570.2PF00171.17Aldedh414663.70E-83


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.894
SRR1783600control0.878
SRR1783602moderate drought stress1.687
SRR1811619moderate drought stress1.269

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.797
DRR006520Root Summer glycyrrhizin high producing strain1.087
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain3.916
DRR006524Root Summer glycyrrhizin low producing strain4.339
DRR006525Leaf Summer glycyrrhizin high producing strain8.454
DRR006526Leaf Summer glycyrrhizin high producing strain9.014

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.440
SRR2868004Drought Stress(Tissue:root)6.802
SRR2967015Control (Tissue:root)4.151

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.222
SRR9715740Leave12.029
SRR9715741Leave5.546
SRR9715739Root0.794
SRR9715742Root0.258
SRR9715743Root0.511

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.606
SRR8749028MeJA induced 9h0.484
SRR8749029MeJA induced 9h0.152
SRR8749030Uninduced0.586
SRR8749031Uninduced0.169
SRR8749032Uninduced0.289

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.426
SRR8400027Control-Root2.210

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved