Gene detail information of Glyur000698s00016573.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63610.10cyclin-dependent kinase E;1
NRXP_003523203.10PREDICTED: cyclin-dependent kinase E-1-like isoform X1 [Glycine max]
COGYP_005583841.14.00E-18putative serine/threonine-protein kinase [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]
Swissprottr|Q336M2|CDKE1_ORYSJ0Cyclin-dependent kinase E-1
trEMBLtr|K7KLD7|K7KLD7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38515.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006982629938391-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000698s00016573.1PF00069.20Pkinase1024112.20E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.291
SRR1783600control27.406
SRR1783602moderate drought stress43.955
SRR1811619moderate drought stress44.094

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain45.330
DRR006520Root Summer glycyrrhizin high producing strain45.045
DRR006521Root Winter glycyrrhizin high producing strain65.942
DRR006522Root Winter glycyrrhizin high producing strain64.161
DRR006523Root Summer glycyrrhizin low producing strain49.730
DRR006524Root Summer glycyrrhizin low producing strain49.631
DRR006525Leaf Summer glycyrrhizin high producing strain26.159
DRR006526Leaf Summer glycyrrhizin high producing strain25.872

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.573
SRR2868004Drought Stress(Tissue:root)44.992
SRR2967015Control (Tissue:root)50.736

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.546
SRR9715740Leave27.526
SRR9715741Leave35.736
SRR9715739Root8.077
SRR9715742Root21.644
SRR9715743Root20.156

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.134
SRR8749028MeJA induced 9h60.184
SRR8749029MeJA induced 9h42.231
SRR8749030Uninduced63.236
SRR8749031Uninduced62.113
SRR8749032Uninduced58.518

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.160
SRR8400027Control-Root34.299

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved